Paper Title Number 1
Your Name, You. (2009). "Paper Title Number 1." Journal 1. 1(1).
CV
Education
- B.S. in GitHub, GitHub University, 2012
- M.S. in Jekyll, GitHub University, 2014
- Ph.D in Version Control Theory, GitHub University, 2018 (expected)
Work experience
- Summer 2015: Research Assistant
- Github University
- Duties included: Tagging issues
- Supervisor: Professor Git
- Fall 2015: Research Assistant
- Github University
- Duties included: Merging pull requests
- Supervisor: Professor Hub
Skills
- Skill 1
- Skill 2
- Sub-skill 2.1
- Sub-skill 2.2
- Sub-skill 2.3
- Skill 3
Publications
Paper Title Number 2
Your Name, You. (2010). "Paper Title Number 2." Journal 1. 1(2).
Paper Title Number 3
Your Name, You. (2015). "Paper Title Number 3." Journal 1. 1(3).
Talks
De novo assembly of viral quasispecies using overlap graphs
Conference talk at Conference on Intelligent Systems for Molecular Biology (ISMB), Prague, Czech Republic
Full-length de novo viral quasispecies assembly through variation graph construction
Conference talk at RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-Seq), Paris, France
De novo viral quasispecies assembly using overlap graphs
Conference talk (highlight) at Annual International Conference on Research in Computational Molecular Biology (RECOMB), Paris, France
Strain-aware assembly of genomes from mixed samples using flow variation graphs
Conference talk at Annual International Conference on Research in Computational Molecular Biology (RECOMB), online
A reference-free solution to the viral quasispecies assembly problem
Honorary lecture at Dutch Bioinformatics & Systems Biology Conference (BioSB), online
Virus pangenomics
Summer school lecture at Introduction to Pangenomics, Como, Italy
AmpliDiff: an Optimized Amplicon Sequencing Approach to Estimating Lineage Abundances in Viral Metagenomes
Conference talk at Computability in Europe (CiE) 2023, online
Graph-based algorithms for viral lineage quantification: a wastewater story
Keynote at International Genome Graphs Symposium 2024, Ascona, Switzerland
Teaching
Service and leadership
- Currently signed in to 43 different slack teams